CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ZC3H15
(
Anolis carolinensis
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSACAG00000001916
T02219_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSACAP00000001849
CCCH ZF
75
100
PKSVVCAFYKQGQCTKGDKCKFSHDL
Links
Other
CCCH ZF
family RBPs
Other
Anolis carolinensis
RBPs
131 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
cgd1_1070
Cryptosporidium parvum
cgd1_1070
N
0.000
CMU_035790
Cryptosporidium muris
CMU_035790
N
0.000
NCLIV_021850
Neospora caninum
NCLIV_021850
N
0.000
TGGT1_017860
Toxoplasma gondii
TGGT1_017860
N
0.000
TGME49_003080
Toxoplasma gondii
TGME49_003080
N
0.000
TGVEG_046310
Toxoplasma gondii
TGVEG_046310
N
0.000