ZC3H12D (Oryzias latipes)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSORLG00000015280 T03150_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000019139 CCCH ZF 250 263
ENSORLP00000019139 CCCH ZF 258 273

Links

Other CCCH ZF family RBPs
Other Oryzias latipes RBPs

14 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CpipJ_CPIJ001189 Culex pipiens CpipJ_CPIJ001189 N 0.774
gw1.5.847.1 Lottia gigantea gw1.5.847.1 N 0.742
PHUM352150 Pediculus humanus PHUM352150 N 0.710
ZC3H12D Taeniopygia guttata ENSTGUG00000010664 N 0.806
ZC3H12D Tupaia belangeri ENSTBEG00000000892 N 0.806
ZC3H12D Ochotona princeps ENSOPRG00000014034 N 0.871
ZC3H12D Monodelphis domestica ENSMODG00000016829 N 0.833
ZC3H12D Macropus eugenii ENSMEUG00000004686 N 0.774
ZC3H12D Gasterosteus aculeatus ENSGACG00000006636 N 0.903
ZC3H12D Echinops telfairi ENSETEG00000016119 N 0.867
CPIJ001189 Culex quinquefasciatus CPIJ001189 N 0.774
AGAP001272 Anopheles gambiae AGAP001272 N 0.774
AAEL011652 Aedes aegypti AAEL011652 N 0.774
Ame_R008666 Ailuropoda melanoleuca Ame_R008666 N 0.900