CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Y60A9.3
(
Caenorhabditis elegans
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
Y60A9.3
T04188_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Y60A9.3
CCCH ZF
94
115
YGFHRRGQKCAYGEKCKFAHSV
Y60A9.3
CCCH ZF
130
155
YKTVLCNKFSTTGHCKYGIRCQFIHR
Links
Other
CCCH ZF
family RBPs
Other
Caenorhabditis elegans
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
C35D6.4
Caenorhabditis elegans
C35D6.4
N
0.868
F38C2.7
Caenorhabditis elegans
F38C2.7
N
0.868
Y116A8C.19
Caenorhabditis elegans
Y116A8C.19
N
0.774