CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
TEQG_03563
(
Trichophyton equinum
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
TEQG_03563
T08716_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
TEQG_03563T0
CCHC ZF
51
68
DTCRNCGQAGHFARECPE
TEQG_03563T0
CCHC ZF
74
91
GACFNCGQEGHNKSDCPN
TEQG_03563T0
CCHC ZF
97
114
GTCRVCEKEGHPAAECPD
TEQG_03563T0
CCHC ZF
118
135
DICKNCKGEGHKTMECTE
TEQG_03563T0
CCHC ZF
266
283
PKCSNCGKMGHIMKSCKE
TEQG_03563T0
CCHC ZF
293
310
VKCVNCKQPGHRARDCKE
TEQG_03563T0
CCHC ZF
316
330
FACRNCGKGGHRSND
TEQG_03563T0
CCHC ZF
340
357
VECKRCNEVGHFAKDCPQ
TEQG_03563T0
CCHC ZF
362
379
RACRNCGSEDHIARDCDQ
TEQG_03563T0
CCHC ZF
386
403
VTCRNCEEMGHFSRDCTK
TEQG_03563T0
CCHC ZF
410
427
VKCSCCGEMGHTIRRCPQ
Links
Other
CCHC ZF
family RBPs
Other
Trichophyton equinum
RBPs
9 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Glyma15g42820.1
Glycine max
Glyma15g42820.1
N
0.000