CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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BGIOSIBCE011830
(
Oryza indica
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
BGIOSIBCE011830
T09442_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSIBCE011830
CCHC ZF
125
142
GRCFDCGVRGHLAKDCME
Links
Other
CCHC ZF
family RBPs
Other
Oryza indica
RBPs
1 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LOC_Os10g25990
Oryza sativa
LOC_Os10g25990
N
0.722