CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSACAG00000005076
(
Anolis carolinensis
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
ENSACAG00000005076
T09948_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSACAP00000004946
CCHC ZF
211
228
NLCWYCGNGGHFARECPA
Links
Other
CCHC ZF
family RBPs
Other
Anolis carolinensis
RBPs
35 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
NRP1
Saccharomyces cerevisiae
YDL167C
N
0.000
SAKL0F11352g
Lachancea kluyveri
SAKL0F11352g
N
0.000
KLTH0H01276g
Kluyveromyces thermotolerans
KLTH0H01276g
N
0.000
KLLA0D12364g
Kluyveromyces lactis
KLLA0D12364g
N
0.000
ACL149W
Ashbya gossypii
ACL149W
N
0.000
A7TL06_VANPO
Vanderwaltozyma polyspora
A7TL06_VANPO
N
0.000
3383_YDL167C
Saccharomyces bayanus
3383_YDL167C
N
0.000
3156_YDL167C
Saccharomyces paradoxus
3156_YDL167C
N
0.000
2607_YDL167C
Saccharomyces mikatae
2607_YDL167C
N
0.000
Scas_Contig537.5
Saccharomyces castellii
Scas_Contig537.5
N
0.000
ZYRO0F11682g
Zygosaccharomyces rouxii
ZYRO0F11682g
N
0.000