CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSTRUG00000000976
(
Takifugu rubripes
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
ENSTRUG00000000976
T10529_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTRUP00000002301
CCHC ZF
116
133
LKCFNCREEGHLARACPS
Links
Other
CCHC ZF
family RBPs
Other
Takifugu rubripes
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
nasonia_NCBI_hmm234754
Nasonia vitripennis
nasonia_NCBI_hmm234754
N
0.722
ENSTNIG00000001185
Tetraodon nigroviridis
ENSTNIG00000001185
N
0.722
ENSTNIG00000001595
Tetraodon nigroviridis
ENSTNIG00000001595
N
0.722