LOC_Os05g39030 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os05g39030 T11529_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os05g39030.1 CCHC ZF 39 55
LOC_Os05g39030.1 CCHC ZF 211 228

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

10 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
NAB3 Saccharomyces cerevisiae YPL190C N 0.000
Skud_Contig1252.2 Saccharomyces kudriavzevii Skud_Contig1252.2 N 0.000
21543_Multiple Saccharomyces mikatae 21543_Multiple N 0.000
24695_YPL190C Saccharomyces bayanus 24695_YPL190C N 0.000
KLLA0E19229g Kluyveromyces lactis KLLA0E19229g N 0.000
ZYRO0G08360g Zygosaccharomyces rouxii ZYRO0G08360g N 0.000