CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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SB08G018400
(
Sorghum bicolor
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
Sb08g018400
T12903_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb08g018400.1
CCHC ZF
982
999
KICYKCKKAGHLSRDCPE
Links
Other
CCHC ZF
family RBPs
Other
Sorghum bicolor
RBPs
24 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
NCU06894
Neurospora crassa
NCU06894
N
0.000
estExt_fgenesh2_pg.C_80267
Neurospora discreta
estExt_fgenesh2_pg.C_80267
N
0.000
BGIBMGA007366
Bombyx mori
BGIBMGA007366
N
0.000