CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Skud_Contig1846.2
(
Saccharomyces kudriavzevii
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
Skud_Contig1846.2
T15136_0.6
SGD (2003-Oct-3)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Skud_Contig1846.2
CCHC ZF
15
32
RLCFNCGKPGHFSRMCPL
Links
Other
CCHC ZF
family RBPs
Other
Saccharomyces kudriavzevii
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PTTG_07033
Puccinia triticina
PTTG_07033
N
0.722
LOC_Os03g33140
Oryza sativa
LOC_Os03g33140
N
0.722
LOC_Os04g44490
Oryza sativa
LOC_Os04g44490
N
0.722
genemark.2333_g
Pleurotus ostreatus
genemark.2333_g
N
0.722