17968_YNL255C (Saccharomyces mikatae)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 17968_YNL255C T15181_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
17968_YNL255C CCHC ZF 4 21
17968_YNL255C CCHC ZF 23 40
17968_YNL255C CCHC ZF 47 63
17968_YNL255C CCHC ZF 65 82
17968_YNL255C CCHC ZF 92 109
17968_YNL255C CCHC ZF 116 133
17968_YNL255C CCHC ZF 135 152

Links

Other CCHC ZF family RBPs
Other Saccharomyces mikatae RBPs

13 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GIS2 Saccharomyces cerevisiae YNL255C N 0.984
SAKL0C03300g Lachancea kluyveri SAKL0C03300g N 0.720
Kwal_13509 Kluyveromyces waltii Kwal_13509 N 0.802
KLTH0F02904g Kluyveromyces thermotolerans KLTH0F02904g N 0.794
KLLA0C02805g Kluyveromyces lactis KLLA0C02805g N 0.746
CAGL0J07898g Candida glabrata CAGL0J07898g N 0.840
AFR646W Ashbya gossypii AFR646W N 0.760
A7TF51_VANPO Vanderwaltozyma polyspora A7TF51_VANPO N 0.762
19792_YNL255C Saccharomyces bayanus 19792_YNL255C N 0.968
18392_YNL255C Saccharomyces paradoxus 18392_YNL255C N 0.976
Skud_Contig1557.2 Saccharomyces kudriavzevii Skud_Contig1557.2 N 0.968
Scas_Contig706.26 Saccharomyces castellii Scas_Contig706.26 N 0.786
ZYRO0F16148g Zygosaccharomyces rouxii ZYRO0F16148g N 0.794