CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CBG07980
(
Caenorhabditis briggsae
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
CBG07980
T18238_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBG07980
KH
199
262
RHEMIIRNSDSGKIMGVKGRRVAAVEQLTNTVISFQKVDAKSKERTLTITASTMEDIERAKDMI
Links
Other
KH
family RBPs
Other
Caenorhabditis briggsae
RBPs
7 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
BGIOSIBCE016785
Oryza indica
BGIOSIBCE016785
N
0.000
LOC_Os04g54870
Oryza sativa
LOC_Os04g54870
N
0.000
SB06G030330
Sorghum bicolor
Sb06g030330
N
0.000
mgf001414m
Mimulus guttatus
mgf001414m
N
0.000
GRMZM2G072264
Zea mays
GRMZM2G072264
N
0.000
GRMZM2G114325
Zea mays
GRMZM2G114325
N
0.000
PDK_20s1325283g003
Phoenix dactylifera
PDK_20s1325283g003
N
0.000