CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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HDLBP
(
Otolemur garnettii
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSOGAG00000000738
T19216_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOGAP00000000664
KH
96
141
GEQAKICLEIMQRTGAHLELSLAKDQGLSIMVSGKLDAVMKARKDI
ENSOGAP00000000664
KH
150
210
SATVAIPKEHHRFVIGKNGEKLQDLELKTATKIQIPRPDDPSNQIKITGTKEGIEKARHEV
ENSOGAP00000000664
KH
288
348
TIAVEVKKSQHKYVIGPKGNSLQEILERTGVSVEIPPSDSISETVILRGEPEKLGQALTEV
ENSOGAP00000000664
KH
357
415
VSSVTAPSWLHRFIIGKKGQNLAKITQQMPKVHIEFTEGEDRIALEGPTEDVNVAQEQI
ENSOGAP00000000664
KH
428
488
YVEINIDHKFHRHLIGKSGANINRIKDQYKVSVRIPPDSEKSNLIRIEGDPQGVQQAKREL
ENSOGAP00000000664
KH
500
529
TKDLLIEQRFHRTIIGQKGERIREIRDKPE
ENSOGAP00000000664
KH
564
624
SISVPIFKQFHKNIIGKGGANIKKIREESNTKIDLPAENSNSETIVITGKRANCEAARSRI
ENSOGAP00000000664
KH
636
697
EVEVSIPAKLHNSLIGTKGRLIRSIMEECGGVHIHFPVEGSGSDTVIIRGPSSDVEKAKKQL
ENSOGAP00000000664
KH
710
771
TVDIRAKPEYHKFLIGKGGGKIRKVRDNTGARIIFPAAEDKDQDLITIVGKEDAVREAQKEL
ENSOGAP00000000664
KH
783
844
EDYMLVDPKHHRHFVIRRGQVLREIAEEYGGVMVSFPRSGTQSDRVTLKGAKDCVEAAKRRI
ENSOGAP00000000664
KH
856
948
TVECAIPQKFHRSVMGPKGSRIQQITRDFNVQIKFPDREENPVHSMEPVVQENGDEASEGREAKEAEPGSPRRCDIITISGRREKCEAAKEAL
ENSOGAP00000000664
KH
1110
1171
SEDVPLDHRVHARIIGARGKAIRKIMDEFKVDIRFPQSGAPDPNCVSVTGLPENVEEAIDHI
Links
Other
KH
family RBPs
Other
Otolemur garnettii
RBPs
1 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
HDLBP
Homo sapiens
ENSG00000115677
N
0.706