CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PPA11211
(
Pristionchus pacificus
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
PPA11211
T20248_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PPA11211
KH
215
279
REEITIRNADSGKLMGVKGRRVALVEQISGSVISFQKVTDLKSKARTLTITASDQESIEKAKSLI
Links
Other
KH
family RBPs
Other
Pristionchus pacificus
RBPs
7 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LOAG_08941
Loa loa
LOAG_08941
N
0.723
WUBG_05417
Wuchereria bancrofti
WUBG_05417
N
0.708
CBG07980
Caenorhabditis briggsae
CBG07980
N
0.708
CBN22901
Caenorhabditis brenneri
CBN22901
N
0.708
CJA04133
Caenorhabditis japonica
CJA04133
N
0.708
CRE13901
Caenorhabditis remanei
CRE13901
N
0.708
Y18D10A.8
Caenorhabditis elegans
Y18D10A.8
N
0.708