estExt_fgenesh5_synt.C_10084 (Volvox carteri)
La,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF05383 (La)
PF00076 (RRM_1) 		IPR006630
IPR000504 		estExt_fgenesh5_synt.C_10084 T23583_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh5_synt.C_10084 La 12 83
estExt_fgenesh5_synt.C_10084 RRM 116 183
estExt_fgenesh5_synt.C_10084 RRM 357 418

Links

Other La,RRM family RBPs
Other Volvox carteri RBPs

1 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os03g26560 Oryza sativa LOC_Os03g26560 N 0.000
LOC_Os12g14010 Oryza sativa LOC_Os12g14010 N 0.000
LOC_Os09g04570 Oryza sativa LOC_Os09g04570 N 0.000
LOC_Os05g39030 Oryza sativa LOC_Os05g39030 N 0.000
LOC_Os05g17240 Oryza sativa LOC_Os05g17240 N 0.000
LOC_Os05g17220 Oryza sativa LOC_Os05g17220 N 0.000
LOC_Os04g29500 Oryza sativa LOC_Os04g29500 N 0.000
LOC_Os04g19410 Oryza sativa LOC_Os04g19410 N 0.000
LOC_Os03g33050 Oryza sativa LOC_Os03g33050 N 0.000
LOC_Os12g25590 Oryza sativa LOC_Os12g25590 N 0.000