CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AFLA_007170
(
Aspergillus flavus
)
PUF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00806 (PUF)
IPR001313
CADAFLAG00010780
T24079_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADAFLAP00010780
PUF
415
442
QAYPLMINRFGNFLVQRCFEHGTPEQIV
CADAFLAP00010780
PUF
447
480
AIKGNTLSLSMDPFGCHVIQKAFDCVPEEHKAVM
CADAFLAP00010780
PUF
487
508
RIPETVIHRYACHVWQKLFELR
CADAFLAP00010780
PUF
524
555
LRGMWHEVALGETGSLVVQNIFENCVEDEKRP
CADAFLAP00010780
PUF
559
593
EVLTKIDLLAHGQFGNWCIQHICEHGAPHDKNRAI
CADAFLAP00010780
PUF
600
630
SVDYSMDQFASKIVEKCLKIGGSEFLDRYLT
CADAFLAP00010780
PUF
644
672
LIDIAGDQYGNYLIQWILMNAALHQRELV
Links
Other
PUF
family RBPs
Other
Aspergillus flavus
RBPs
31 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RBMS2
Tarsius syrichta
ENSTSYG00000001167
N
0.000