estExt_gwp_genewisePlus_human.C_chr_1.11498 (Pichia stipitis)
PUF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF) IPR001313 estExt_gwp_genewisePlus_human.C_chr_1.11498 T24829_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_gwp_genewisePlus_human.C_chr_1.11498 PUF 493 524
estExt_gwp_genewisePlus_human.C_chr_1.11498 PUF 529 563
estExt_gwp_genewisePlus_human.C_chr_1.11498 PUF 565 595
estExt_gwp_genewisePlus_human.C_chr_1.11498 PUF 601 635
estExt_gwp_genewisePlus_human.C_chr_1.11498 PUF 637 671
estExt_gwp_genewisePlus_human.C_chr_1.11498 PUF 673 707
estExt_gwp_genewisePlus_human.C_chr_1.11498 PUF 710 743
estExt_gwp_genewisePlus_human.C_chr_1.11498 PUF 766 794

Links

Other PUF family RBPs
Other Pichia stipitis RBPs

6 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CLUG_04502 Candida lusitaniae CLUG_04502 N 0.777
CTRG_03880 Candida tropicalis CTRG_03880 N 0.756
DEHA0C07942g Debaryomyces hansenii DEHA0C07942g N 0.861
PUF3 Candida albicans orf19.1795 N 0.749
PGUG_05371 Candida guilliermondii PGUG_05371 N 0.813
Cd36_45030 Candida dubliniensis Cd36_45030 N 0.738