fgenesh1_pm.C_chr_3000287 (Mycosphaerella graminicola)
PUF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF)
PF00076 (RRM_1) 		IPR001313
IPR000504 		fgenesh1_pm.C_chr_3000287 T25363_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.C_chr_3000287 RRM 449 511
fgenesh1_pm.C_chr_3000287 PUF 658 692
fgenesh1_pm.C_chr_3000287 PUF 694 729
fgenesh1_pm.C_chr_3000287 PUF 731 764
fgenesh1_pm.C_chr_3000287 PUF 767 801
fgenesh1_pm.C_chr_3000287 PUF 810 838

Links

Other PUF,RRM family RBPs
Other Mycosphaerella graminicola RBPs

41 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CpipJ_CPIJ001189 Culex pipiens CpipJ_CPIJ001189 N 0.000
gw1.5.847.1 Lottia gigantea gw1.5.847.1 N 0.000
e_gw1.5.374.1 Trichoplax adhaerens e_gw1.5.374.1 N 0.000
PHUM352150 Pediculus humanus PHUM352150 N 0.000
ZC3H12D Taeniopygia guttata ENSTGUG00000010664 N 0.000
ZC3H12D Tupaia belangeri ENSTBEG00000000892 N 0.000
ZC3H12D Oryzias latipes ENSORLG00000015280 N 0.000
ZC3H12D Ochotona princeps ENSOPRG00000014034 N 0.000
ZC3H12D Monodelphis domestica ENSMODG00000016829 N 0.000
ZC3H12D Macropus eugenii ENSMEUG00000004686 N 0.000
ZC3H12D Gasterosteus aculeatus ENSGACG00000006636 N 0.000
ZC3H12D Echinops telfairi ENSETEG00000016119 N 0.000
AGAP001272 Anopheles gambiae AGAP001272 N 0.000
AAEL011652 Aedes aegypti AAEL011652 N 0.000
Ame_R008666 Ailuropoda melanoleuca Ame_R008666 N 0.000