CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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fgenesh1_pm.00866_#_655
(
Aspergillus carbonarius
)
RanBP ZF,RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
PF00076 (RRM_1)
IPR001876
IPR000504
fgenesh1_pm.00866_#_655
T25872_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pm.00866_#_655
RRM
240
310
LHLSGLPHDTTQSELESWFTQFGGRPIAFWTLRTPDQHKPTGTGFAVFSSHEEAAESLCMNGRALNEKAIE
fgenesh1_pm.00866_#_655
RanBP ZF
337
365
RPGDWTCPSCGFSNFQRRTACFRCSFPAM
fgenesh1_pm.00866_#_655
RanBP ZF
411
442
RAGDWKCGSEGCGYHNFAKNINCLRCGAPRSG
Links
Other
RanBP ZF,RRM
family RBPs
Other
Aspergillus carbonarius
RBPs
50 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
HCAG_06464
Histoplasma capsulatum
HCAG_06464
N
0.000