CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PPA23383
(
Pristionchus pacificus
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
PPA23383
T27103_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PPA23383
RanBP ZF
10
41
REGEWACVDAKCANINKDHHKQCTTCAKKRPE
PPA23383
RanBP ZF
64
92
AEDWACTKCGNVNWARRNTCNMCNAPKVG
Links
Other
RanBP ZF
family RBPs
Other
Pristionchus pacificus
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Bm1_26850
Brugia malayi
Bm1_26850
N
0.705
LOAG_07588
Loa loa
LOAG_07588
N
0.721
WUBG_03458
Wuchereria bancrofti
WUBG_03458
N
0.705