CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CHGG_04655
(
Chaetomium globosum
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
CHGG_04655
T28603_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CHGT_04655
RRM
258
322
VYIRGLHPTTDDELLHRYASRFGKVEQSKAIIDTSTGACKGFGFAKFADVRDSEKCIRGFYHLGY
CHGT_04655
RRM
346
412
LYLSNLPKRLNESELNAIFAGYHVVSSKILRDSMGNSRGVGFARFETRDECEDIIKKYHGASIGEEG
Links
Other
RRM
family RBPs
Other
Chaetomium globosum
RBPs
15 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Chlre2_kg.scaffold_32000083
Chlamydomonas reinhardtii
Chlre2_kg.scaffold_32000083
N
0.000