CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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FOXG_08275
(
Fusarium oxysporum
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
FOXG_08275
T29309_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FOXG_08275T0
RRM
242
306
VYIRGLYPTTDDQTLYQFTSRFGEVETSKAIIDTATGACKGFGFAKFFDVAHSEMCIRGFHRLGY
FOXG_08275T0
RRM
349
416
LYISNLPKSLTEVELGAIFRDYTILSSKILRDSMGNSRGVGFARFENRDICDDVIERFHGSSVGDEGL
Links
Other
RRM
family RBPs
Other
Fusarium oxysporum
RBPs
17 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
BRE5
Saccharomyces cerevisiae
YNR051C
N
0.000
18975_YNR051C
Saccharomyces mikatae
18975_YNR051C
N
0.000
21881_YNR051C
Saccharomyces bayanus
21881_YNR051C
N
0.000