CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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FOXG_13842
(
Fusarium oxysporum
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
FOXG_13842
T29326_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FOXG_13842T0
RRM
147
217
IYIGRIPHGFYEHEMRQYFEQFGPIVALRLSRNKKTGASKHYAFVKFEEASTAEIVCKTMDNYLLFGHILK
Links
Other
RRM
family RBPs
Other
Fusarium oxysporum
RBPs
17 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AMAG_07778
Allomyces macrogynus
AMAG_07778
N
0.000
AMAG_09721
Allomyces macrogynus
AMAG_09721
N
0.000
EHI_142020
Entamoeba histolytica
EHI_142020
N
0.000
EIN_288540
Entamoeba invadens
EIN_288540
N
0.000
e_gw1.7.303.1
Ostreococcus RCC809
e_gw1.7.303.1
N
0.000
eugene.0700010461
Ostreococcus lucimarinus
eugene.0700010461
N
0.000
e_gw1.07.00.268.1
Ostreococcus tauri
e_gw1.07.00.268.1
N
0.000