CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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FVEG_00993
(
Fusarium verticillioides
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
FVEG_00993
T29333_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FVEG_00993T0
RRM
16
83
LFVKNLSYNVTPEELFDLFGKFGPIRQVRQGIANNTKGTAFVVYEDVADAKQACDKLNGFNFQNRYLV
Links
Other
RRM
family RBPs
Other
Fusarium verticillioides
RBPs
47 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ppa014560m
Prunus persica
ppa014560m
N
0.000
ppa016350m
Prunus persica
ppa016350m
N
0.000
ppa016453m
Prunus persica
ppa016453m
N
0.000
ppa020502m
Prunus persica
ppa020502m
N
0.000
ppa022025m
Prunus persica
ppa022025m
N
0.000