CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PITG_18963
(
Phytophthora infestans
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
PITG_18963
T30183_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PITG_18963T0
RRM
543
615
LMIRNIPNKYTQQMLLSEINRNHRGNYDFFYLPIDFKNKCNMGYAFINFIEAALIEAFHKEFDGQKWTNFNSE
Links
Other
RRM
family RBPs
Other
Phytophthora infestans
RBPs
2 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
FGSG_02561
Fusarium graminearum
FGSG_02561
N
0.000
FVEG_09141
Fusarium verticillioides
FVEG_09141
N
0.000
e_gw1.20.1003.1
Nectria haematococca
e_gw1.20.1003.1
N
0.000
estExt_Genewise1.C_170101
Trichoderma atroviride
estExt_Genewise1.C_170101
N
0.000