nasonia_NCBI_hmm368623 (Nasonia vitripennis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 nasonia_NCBI_hmm368623 T32226_0.6 DroSpeGe (2008-Jul-18)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
B52
M334_0.6 		Drosophila melanogaster GRUCAACCNGGCGACMG SELEX
Cook et al.(2011)
802_9111335 		0.822
B52
M126_0.6 		Drosophila melanogaster GGASGRV RNAcompete
Ray et al.(2013)
RNCMPT00134 		0.822
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
nasonia_NCBI_hmm368623 RRM 5 67
nasonia_NCBI_hmm368623 RRM 108 173

Links

Other RRM family RBPs
Other Nasonia vitripennis RBPs

87 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
HNRNPA2B1 Homo sapiens ENSG00000122566 D 0.000
HNRNPA2B1 Anolis carolinensis ENSACAG00000012992 I 0.000
HNRNPA2B1 Myotis lucifugus ENSMLUG00000007578 I 0.000
HNRNPA2B1 Macaca mulatta ENSMMUG00000003619 I 0.000
HNRNPA2B1 Monodelphis domestica ENSMODG00000000603 I 0.000
Hnrnpa2b1 Mus musculus ENSMUSG00000004980 I 0.000
HNRNPA2B1 Ornithorhynchus anatinus ENSOANG00000009159 I 0.000
HNRNPA2B1 Oryctolagus cuniculus ENSOCUG00000026859 I 0.000
ENSPPYG00000017715 Pongo pygmaeus ENSPPYG00000017715 I 0.000
HNRNPA2B1 Pan troglodytes ENSPTRG00000019002 I 0.000
HNRNPA2B1 Pteropus vampyrus ENSPVAG00000006296 I 0.000
Hnrnpa2b1 Rattus norvegicus ENSRNOG00000011175 I 0.000
ENSSTOG00000006202 Spermophilus tridecemlineatus ENSSTOG00000006202 I 0.000
HNRNPA2B1 Taeniopygia guttata ENSTGUG00000002869 I 0.000
HNRNPA2B1 Tursiops truncatus ENSTTRG00000000709 I 0.000
HNRNPA2B1 Vicugna pacos ENSVPAG00000010417 I 0.000
HNRNPA2B1 Meleagris gallopavo ENSMGAG00000010635 I 0.000
ENSMEUG00000014479 Macropus eugenii ENSMEUG00000014479 I 0.000
ROA2_BOVIN Bos taurus ENSBTAG00000005726 I 0.000
HNRNPA2B1 Canis familiaris ENSCAFG00000002885 I 0.000
HNRNPA2B1 Choloepus hoffmanni ENSCHOG00000013832 I 0.000
LOC100401647 Callithrix jacchus ENSCJAG00000007908 I 0.000
ENSCJAG00000021872 Callithrix jacchus ENSCJAG00000021872 I 0.000
HNRNPA2B1 Dasypus novemcinctus ENSDNOG00000012928 I 0.000
Hnrnpa2b1 Dipodomys ordii ENSDORG00000005482 I 0.000
LOC100068539 Equus caballus ENSECAG00000000782 I 0.000
HNRNPA2B1 Echinops telfairi ENSETEG00000018577 I 0.000
Q5ZME1_CHICK Gallus gallus ENSGALG00000011036 I 0.000
HNRNPA2B1 Gorilla gorilla ENSGGOG00000017072 I 0.000
HNRNPA2B1 Loxodonta africana ENSLAFG00000006902 I 0.000
ENSMEUG00000001084 Macropus eugenii ENSMEUG00000001084 I 0.000
Ame_R000626 Ailuropoda melanoleuca Ame_R000626 I 0.000
ENSCPOG00000020972 Cavia porcellus ENSCPOG00000020972 N 0.000