CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AGAP006755
(
Anopheles gambiae
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
AGAP006755
T32522_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
snRNP70K
M134_0.6
Drosophila melanogaster
AUCAHG
RNAcompete
Ray et al.(2013)
RNCMPT00143
0.845
SNRNP70
M068_0.6
Homo sapiens
RWUCAAG
RNAcompete
Ray et al.(2013)
RNCMPT00070
0.817
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AGAP006755-PA
RRM
104
174
LFVARINYDTSESKLRREFEIYGNIKKIIMINDKDTGKPRGYAFIEYEHERDMHAAYKHADGKKIDGKRVL
Links
Other
RRM
family RBPs
Other
Anopheles gambiae
RBPs
59 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PABG_03851
Paracoccidioides brasiliensis
PABG_03851
N
0.000