CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CBN25209
(
Caenorhabditis brenneri
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
CBN25209
T34084_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBN25209
RRM
87
160
CYVGNLLWYTTDADLMKAIISTGLPRSQFADMKFFENRTNGQSKGYALLVLNSDSAVKQIMEQLPTKTIHGQSP
Links
Other
RRM
family RBPs
Other
Caenorhabditis brenneri
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CBG21723
Caenorhabditis briggsae
CBG21723
N
0.892
CBN18741
Caenorhabditis brenneri
CBN18741
N
1.000
CJA00774
Caenorhabditis japonica
CJA00774
N
0.853
CRE04437
Caenorhabditis remanei
CRE04437
N
0.905
CRE25790
Caenorhabditis remanei
CRE25790
N
0.905
cfim-2
Caenorhabditis elegans
D1046.1
N
0.905