CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
LOC786944
(
Bos taurus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSBTAG00000040273
T34957_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSBTAP00000052166
RRM
16
86
LKVDNLTDPISHSTLRCIFEKYGPISDVYILRDRFTQESRDFAFICFHDKHHAEEAMDALDGVMLDGHVLQ
Links
Other
RRM
family RBPs
Other
Bos taurus
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
SRSF2
Sus scrofa
ENSSSCG00000012212
I
0.704
LOC530295
Bos taurus
ENSBTAG00000038090
N
1.000
ENSBTAG00000038147
Bos taurus
ENSBTAG00000038147
N
0.845