ENSCJAG00000021073 (Callithrix jacchus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCJAG00000021073 T35689_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.702
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.702
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.702
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000050568 RRM 2 70
ENSCJAP00000050568 RRM 93 155

Links

Other RRM family RBPs
Other Callithrix jacchus RBPs

1 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
HNRNPA3 Anolis carolinensis ENSACAG00000012234 I 0.000
HNRNPA3 Oryctolagus cuniculus ENSOCUG00000002743 I 0.000
ENSPPYG00000001326 Pongo pygmaeus ENSPPYG00000001326 I 0.000
ENSPPYG00000012967 Pongo pygmaeus ENSPPYG00000012967 I 0.000
HNRNPA3 Pan troglodytes ENSPTRG00000012676 I 0.000
HNRNPA3 Pteropus vampyrus ENSPVAG00000010380 I 0.000
LOC100360986 Rattus norvegicus ENSRNOG00000001556 I 0.000
D3ZK54_RAT Rattus norvegicus ENSRNOG00000025482 I 0.000
ROA3_RAT Rattus norvegicus ENSRNOG00000027001 I 0.000
D3ZX95_RAT Rattus norvegicus ENSRNOG00000027006 I 0.000
D3ZTB7_RAT Rattus norvegicus ENSRNOG00000031608 I 0.000
ENSRNOG00000033211 Rattus norvegicus ENSRNOG00000033211 I 0.000
D3ZXA3_RAT Rattus norvegicus ENSRNOG00000038905 I 0.000
HNRNPA3 Sus scrofa ENSSSCG00000015988 I 0.000
HNRNPA3 Taeniopygia guttata ENSTGUG00000008996 I 0.000
HNRNPA3 Tursiops truncatus ENSTTRG00000014225 I 0.000
hnrnpa3 Xenopus tropicalis ENSXETG00000001806 I 0.000
AAA49949 Xenopus laevis AAA49949 I 0.000
Gm8991 Mus musculus ENSMUSG00000059179 I 0.000
Hnrnpa3 Mus musculus ENSMUSG00000059005 I 0.000
HNRNPA3 Monodelphis domestica ENSMODG00000019803 I 0.000
LOC781499 Bos taurus ENSBTAG00000021580 I 0.000
ENSCAFG00000013497 Canis familiaris ENSCAFG00000013497 I 0.000
ENSCJAG00000008584 Callithrix jacchus ENSCJAG00000008584 I 0.000
LOC100411573 Callithrix jacchus ENSCJAG00000023383 I 0.000
ENSCPOG00000004251 Cavia porcellus ENSCPOG00000004251 I 0.000
HNRNPA3 Cavia porcellus ENSCPOG00000011301 I 0.000
HNRNPA3 Dasypus novemcinctus ENSDNOG00000019022 I 0.000
LOC100066794 Equus caballus ENSECAG00000023237 I 0.000
HNRNPA3 Felis catus ENSFCAG00000012146 I 0.000
HNRNPA3 Homo sapiens ENSG00000170144 I 0.000
HNRPA3 Gallus gallus ENSGALG00000009250 I 0.000
HNRNPA3 Gorilla gorilla ENSGGOG00000006130 I 0.000
HNRNPA3 Loxodonta africana ENSLAFG00000027712 I 0.000
HNRNPA3 Macropus eugenii ENSMEUG00000013622 I 0.000
HNRNPA3 Meleagris gallopavo ENSMGAG00000009565 I 0.000
HNRNPA3 Myotis lucifugus ENSMLUG00000003906 I 0.000
ENSMMUG00000001858 Macaca mulatta ENSMMUG00000001858 I 0.000
P51968 Xenopus laevis P51968 I 0.000