CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PABPC4
(
Dasypus novemcinctus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSDNOG00000018444
T36378_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDNOP00000014319
RRM
61
104
XXXXVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVL
ENSDNOP00000014319
RRM
128
153
VYIKNFGEEVDDESLKDLFSQFXXXX
ENSDNOP00000014319
RRM
231
299
LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLY
Links
Other
RRM
family RBPs
Other
Dasypus novemcinctus
RBPs
2 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSSTOG00000016395
Spermophilus tridecemlineatus
ENSSTOG00000016395
N
0.720
PABPC4
Tupaia belangeri
ENSTBEG00000009035
N
0.906