TARDBP (Erinaceus europaeus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSEEUG00000003755 T36756_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
TARDBP
M074_0.6 		Homo sapiens GAAUGD RNAcompete
Ray et al.(2013)
RNCMPT00076 		0.942
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSEEUP00000003409 RRM 106 174
ENSEEUP00000003409 RRM 193 244

Links

Other RRM family RBPs
Other Erinaceus europaeus RBPs

59 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
setd1ba Danio rerio ENSDARG00000060847 N 0.000
ENSDARG00000078930 Danio rerio ENSDARG00000078930 N 0.000
SETD1B Gasterosteus aculeatus ENSGACG00000017002 N 0.000
SETD1B Oryzias latipes ENSORLG00000008435 N 0.000
SETD1B Tetraodon nigroviridis ENSTNIG00000009090 N 0.000
SETD1B Takifugu rubripes ENSTRUG00000009533 N 0.000