CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins

RBP Information

ESRP2 *(Gasterosteus aculeatus)* RRM
Pfam ID	Interpro ID	Gene ID	CISBP-RNA ID	Sequence source
PF00076 (RRM_1)	IPR000504	ENSGACG00000016359	T37539_0.6	Ensembl (2011-Oct-26)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Sequence Logo	IUPAC	Type/Study/Study ID	RBD Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID	Species	Sequence Logo	IUPAC	Type/Study/Study ID	RBD Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSGACP00000021596	RRM	226	295	IRARGLPWQSSDQDIARFFKGLSIAKGGVALCLNAQGRRNGEALVRFINSEHRDLALERHKHHMGSRYIE
ENSGACP00000021596	RRM	327	399	IRMRGLPFTATPQDVLSFLGPESPVTDDAEGLLFVKYPDGRPTGDAFVLFSCEEYAQNALKRHKQILGKRYIE
ENSGACP00000021596	RRM	451	524	VRLRGLPYTAGIEDILEFMGEHTVDIKPHGVHMVLNQQQGRPSGDAFIQMKSPDKSFMVAQKCHKKTMKDRYVE
ENSGACP00000021596	RRM	668	739	VRMQGLPYNTGVKDILSFFQGYQQLQPDAVLILYNFSGQCSGEALITFHSEEIARRAVAERSTQPFYGQQVH
ENSGACP00000021599	RRM	227	296	IRARGLPWQSSDQDIARFFKGLSIAKGGVALCLNAQGRRNGEALVRFINSEHRDLALERHKHHMGSRYIE
ENSGACP00000021599	RRM	328	400	IRMRGLPFTATPQDVLSFLGPESPVTDDAEGLLFVKYPDGRPTGDAFVLFSCEEYAQNALKRHKQILGKRYIE
ENSGACP00000021599	RRM	452	525	VRLRGLPYTAGIEDILEFMGEHTVDIKPHGVHMVLNQQQGRPSGDAFIQMKSPDKSFMVAQKCHKKTMKDRYVE

Links
Other RRM family RBPs
Other *Gasterosteus aculeatus* RBPs

55 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name	Species	Gene ID	Motif Evidence	RBD Identity	Action