CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Q5ZKD3_CHICK
(
Gallus gallus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSGALG00000006410
T37654_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGALP00000010334
RRM
137
214
VYVTGLPPDITKDEFVQVMSKGGIIMRDPQTEEHKIKLYKDKEGNLKGDGLCCYLKRESVQLALRLLDEAEIRGYKLH
ENSGALP00000010334
RRM
289
345
IREDLRTECEKFGQVKKVLIFDRHPDGVASVSFKEATEADLCKLTLNGRWFGGRQLS
Links
Other
RRM
family RBPs
Other
Gallus gallus
RBPs
34 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Cd36_81440
Candida dubliniensis
Cd36_81440
N
0.000
GSPATP00002790001
Paramecium tetraurelia
GSPATP00002790001
N
0.000
GSPATP00003061001
Paramecium tetraurelia
GSPATP00003061001
N
0.000