CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
ENSPPYG00000018709
(
Pongo pygmaeus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSPPYG00000018709
T40590_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPPYP00000020985
RRM
38
107
IFVGGIKEDTEEHHLRDYFEQYEKIEVIEIMTDRGSGKKRGFAFVTFDDYDSVDKIVIQKHYTVNGHNCE
Links
Other
RRM
family RBPs
Other
Pongo pygmaeus
RBPs
10 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSOCUG00000023444
Oryctolagus cuniculus
ENSOCUG00000023444
I
0.943
ENSCAFG00000018581
Canis familiaris
ENSCAFG00000018581
N
0.914
ENSTBEG00000002499
Tupaia belangeri
ENSTBEG00000002499
N
0.900
HNRNPA2B1
Sorex araneus
ENSSARG00000007984
N
0.786
ENSPTRG00000019356
Pan troglodytes
ENSPTRG00000019356
N
0.929
HNRNPA3
Macaca mulatta
ENSMMUG00000011937
N
0.800
ENSMEUG00000008083
Macropus eugenii
ENSMEUG00000008083
N
0.943
ENSGGOG00000010478
Gorilla gorilla
ENSGGOG00000010478
N
0.957
Ame_R004137
Ailuropoda melanoleuca
Ame_R004137
N
0.743