CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSPPYG00000025875
(
Pongo pygmaeus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSPPYG00000025875
T40621_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPPYP00000023504
RRM
12
82
VYVRHLPNLLNETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVEFESEDVAKIVAETMNNYLFGERLLK
Links
Other
RRM
family RBPs
Other
Pongo pygmaeus
RBPs
42 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
MK67I_BOVIN
Bos taurus
ENSBTAG00000019387
N
0.859
MKI67IP
Ornithorhynchus anatinus
ENSOANG00000007522
N
0.732
MKI67IP
Oryctolagus cuniculus
ENSOCUG00000007451
N
0.859
MKI67IP
Otolemur garnettii
ENSOGAG00000016968
N
0.845
MKI67IP
Oryzias latipes
ENSORLG00000018551
N
0.732
MKI67IP
Tetraodon nigroviridis
ENSTNIG00000017831
N
0.718
MKI67IP
Takifugu rubripes
ENSTRUG00000005206
N
0.704
MKI67IP
Tursiops truncatus
ENSTTRG00000005849
N
0.845
MKI67IP
Vicugna pacos
ENSVPAG00000005847
N
0.845
mki67ip
Xenopus tropicalis
ENSXETG00000000839
N
0.732
ENSMODG00000008447
Monodelphis domestica
ENSMODG00000008447
N
0.704
XM_001364715.1
Monodelphis domestica
ENSMODG00000000152
N
0.746
MKI67IP
Macaca mulatta
ENSMMUG00000020928
N
0.972
MKI67IP
Canis familiaris
ENSCAFG00000004710
N
0.859
MKI67IP
Choloepus hoffmanni
ENSCHOG00000002227
N
0.831
LOC100386303
Callithrix jacchus
ENSCJAG00000013386
N
0.944
mki67ip
Danio rerio
ENSDARG00000040666
N
0.000
LOC100055172
Equus caballus
ENSECAG00000018478
N
0.859
MKI67IP
Felis catus
ENSFCAG00000010787
N
0.873
MKI67IP
Gallus gallus
ENSGALG00000011650
N
0.761
MKI67IP
Loxodonta africana
ENSLAFG00000030731
N
0.817
MKI67IP
Meleagris gallopavo
ENSMGAG00000011953
N
0.746
MKI67IP
Microcebus murinus
ENSMICG00000015787
N
0.817
Ame_R009999
Ailuropoda melanoleuca
Ame_R009999
N
0.859