CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ESRP2
(
Pteropus vampyrus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSPVAG00000016626
T40983_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
ESRP2
M141_0.6
Homo sapiens
UGGGRAD
RNAcompete
Ray et al.(2013)
RNCMPT00150
0.903
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPVAP00000015690
RRM
249
317
VRARGLPWQSSDQDVARFFKGLNIARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYI
ENSPVAP00000015690
RRM
373
414
DGLLVRPDGRPTGDAFALFACEELAQAALRRHKGMLGKRYIE
ENSPVAP00000015690
RRM
459
531
VRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERAIAAAQRCHKKVMKERYVE
Links
Other
RRM
family RBPs
Other
Pteropus vampyrus
RBPs
28 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ESRP2
Homo sapiens
ENSG00000103067
D
0.903
ESRP2
Bos taurus
ENSBTAG00000004375
I
0.911
ESRP2
Monodelphis domestica
ENSMODG00000005183
I
0.718
Esrp2
Mus musculus
ENSMUSG00000084128
I
0.906
ESRP2
Ornithorhynchus anatinus
ENSOANG00000010972
I
0.713
ESRP2
Oryctolagus cuniculus
ENSOCUG00000001242
I
0.907
ESRP2
Ochotona princeps
ENSOPRG00000013401
I
0.805
ESRP2
Procavia capensis
ENSPCAG00000005215
I
0.823
ENSPPYG00000007484
Pongo pygmaeus
ENSPPYG00000007484
I
0.907
ESRP2
Pan troglodytes
ENSPTRG00000008261
I
0.907
Esrp2
Rattus norvegicus
ENSRNOG00000023177
I
0.814
ESRP2
Sorex araneus
ENSSARG00000014176
I
0.819
ESRP2
Tursiops truncatus
ENSTTRG00000014613
I
0.906
ESRP2
Macaca mulatta
ENSMMUG00000021846
I
0.902
ESRP2
Myotis lucifugus
ENSMLUG00000005934
I
0.823
ESRP2
Microcebus murinus
ENSMICG00000011382
I
0.926
ESRP2
Canis familiaris
ENSCAFG00000020320
I
0.917
LOC100388530
Callithrix jacchus
ENSCJAG00000015709
I
0.902
ESRP2
Dasypus novemcinctus
ENSDNOG00000018588
I
0.809
Esrp2
Dipodomys ordii
ENSDORG00000000665
I
0.800
LOC100066567
Equus caballus
ENSECAG00000017375
I
0.911
ESRP2
Erinaceus europaeus
ENSEEUG00000014033
I
0.911
ESRP2
Echinops telfairi
ENSETEG00000006068
I
0.823
ESRP2
Felis catus
ENSFCAG00000010419
I
0.917
ESRP2
Gorilla gorilla
ENSGGOG00000010150
I
0.903
ESRP2
Loxodonta africana
ENSLAFG00000014609
I
0.800
ESRP2
Macropus eugenii
ENSMEUG00000014322
I
0.741
Ame_R011562
Ailuropoda melanoleuca
Ame_R011562
I
0.917