CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
GG12319
(
Drosophila erecta
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
FBgn0104609
T43339_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0130865
RRM
242
312
LFVCKLNPVTTDDDLEIIFSSFGMLKGCEVIRDRKTGDSLQYAFVEFEEQKSCEAAYFKMDNVLIDDRRIH
Links
Other
RRM
family RBPs
Other
Drosophila erecta
RBPs
160 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GSVIVG00035711001
Vitis vinifera
GSVIVG00035711001
N
0.000
B9IKP1_POPTR
Populus trichocarpa
POPTR_0018s00870
N
0.000