CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PVX_080365
(
Plasmodium vivax
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
PVX_080365
T47487_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PVX_080365
RRM
90
135
NIKIDMPVDEEKKTKGICFVTFNDSFQANEAVKILNKLKLDAKHVL
Links
Other
RRM
family RBPs
Other
Plasmodium vivax
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PCHAS_123310
Plasmodium chabaudi
PCHAS_123310
N
0.837
PFE0885w
Plasmodium falciparum
PFE0885w
N
0.891
PY01620
Plasmodium yoelii
PY01620
N
0.857