CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MGG_13200
(
Magnaporthe oryzae
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
MGG_13200
T59944_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
eIF-2alpha
M231_0.6
Drosophila melanogaster
WGCAUG
RNAcompete
Ray et al.(2013)
RNCMPT00273
0.792
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MGG_13200T0
S1
13
88
YPEIDSFVMVNVKQIADMGAYVKLLEYDGIDGMILLSELSRRRIRSIQKLIRVGRNEVVVVLRVDKEKGYIDLSKR
Links
Other
S1
family RBPs
Other
Magnaporthe oryzae
RBPs
251 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LOC_Os12g34140
Oryza sativa
LOC_Os12g34140
N
0.000
LOC_Os09g17140
Oryza sativa
LOC_Os09g17140
N
0.000
LOC_Os09g13990
Oryza sativa
LOC_Os09g13990
N
0.000
LOC_Os09g09070
Oryza sativa
LOC_Os09g09070
N
0.000
LOC_Os09g01190
Oryza sativa
LOC_Os09g01190
N
0.000
LOC_Os08g24540
Oryza sativa
LOC_Os08g24540
N
0.000
LOC_Os08g24230
Oryza sativa
LOC_Os08g24230
N
0.000
LOC_Os08g21020
Oryza sativa
LOC_Os08g21020
N
0.000
LOC_Os08g20260
Oryza sativa
LOC_Os08g20260
N
0.000
LOC_Os08g10830
Oryza sativa
LOC_Os08g10830
N
0.000
LOC_Os08g08540
Oryza sativa
LOC_Os08g08540
N
0.000
LOC_Os08g05240
Oryza sativa
LOC_Os08g05240
N
0.000
LOC_Os09g23840
Oryza sativa
LOC_Os09g23840
N
0.000
LOC_Os10g12260
Oryza sativa
LOC_Os10g12260
N
0.000
LOC_Os12g34050
Oryza sativa
LOC_Os12g34050
N
0.000
LOC_Os12g30100
Oryza sativa
LOC_Os12g30100
N
0.000
LOC_Os12g29060
Oryza sativa
LOC_Os12g29060
N
0.000
LOC_Os12g29030
Oryza sativa
LOC_Os12g29030
N
0.000
LOC_Os12g26820
Oryza sativa
LOC_Os12g26820
N
0.000
LOC_Os12g11180
Oryza sativa
LOC_Os12g11180
N
0.000
LOC_Os11g31210
Oryza sativa
LOC_Os11g31210
N
0.000
LOC_Os10g18590
Oryza sativa
LOC_Os10g18590
N
0.000
LOC_Os10g17150
Oryza sativa
LOC_Os10g17150
N
0.000
LOC_Os10g14250
Oryza sativa
LOC_Os10g14250
N
0.000
LOC_Os10g13340
Oryza sativa
LOC_Os10g13340
N
0.000
LOC_Os07g30720
Oryza sativa
LOC_Os07g30720
N
0.000
LOC_Os07g14960
Oryza sativa
LOC_Os07g14960
N
0.000
LOC_Os05g07490
Oryza sativa
LOC_Os05g07490
N
0.000
LOC_Os04g38110
Oryza sativa
LOC_Os04g38110
N
0.000
LOC_Os04g21420
Oryza sativa
LOC_Os04g21420
N
0.000
LOC_Os04g18260
Oryza sativa
LOC_Os04g18260
N
0.000
LOC_Os04g13390
Oryza sativa
LOC_Os04g13390
N
0.000
LOC_Os04g06480
Oryza sativa
LOC_Os04g06480
N
0.000
LOC_Os04g06420
Oryza sativa
LOC_Os04g06420
N
0.000
LOC_Os03g23140
Oryza sativa
LOC_Os03g23140
N
0.000
LOC_Os02g24530
Oryza sativa
LOC_Os02g24530
N
0.000
LOC_Os01g24380
Oryza sativa
LOC_Os01g24380
N
0.000
LOC_Os01g24180
Oryza sativa
LOC_Os01g24180
N
0.000
LOC_Os05g08020
Oryza sativa
LOC_Os05g08020
N
0.000
LOC_Os05g17290
Oryza sativa
LOC_Os05g17290
N
0.000
LOC_Os06g32770
Oryza sativa
LOC_Os06g32770
N
0.000
LOC_Os06g32090
Oryza sativa
LOC_Os06g32090
N
0.000
LOC_Os06g31850
Oryza sativa
LOC_Os06g31850
N
0.000
LOC_Os06g31544
Oryza sativa
LOC_Os06g31544
N
0.000
LOC_Os06g25120
Oryza sativa
LOC_Os06g25120
N
0.000
LOC_Os06g17200
Oryza sativa
LOC_Os06g17200
N
0.000
LOC_Os05g20250
Oryza sativa
LOC_Os05g20250
N
0.000
LOC_Os05g19780
Oryza sativa
LOC_Os05g19780
N
0.000
LOC_Os05g18270
Oryza sativa
LOC_Os05g18270
N
0.000
LOC_Os05g18260
Oryza sativa
LOC_Os05g18260
N
0.000
LOC_Os05g17330
Oryza sativa
LOC_Os05g17330
N
0.000
LOC_Os01g02629
Oryza sativa
LOC_Os01g02629
N
0.000