estExt_fgenesh1_pg.C_40456 (Myceliophthora thermophila)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 estExt_fgenesh1_pg.C_40456 T61091_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_40456 S1 143 238
estExt_fgenesh1_pg.C_40456 S1 269 339
estExt_fgenesh1_pg.C_40456 S1 466 527
estExt_fgenesh1_pg.C_40456 S1 552 629
estExt_fgenesh1_pg.C_40456 S1 645 718
estExt_fgenesh1_pg.C_40456 S1 733 811
estExt_fgenesh1_pg.C_40456 S1 829 901
estExt_fgenesh1_pg.C_40456 S1 932 1007
estExt_fgenesh1_pg.C_40456 S1 1040 1115
estExt_fgenesh1_pg.C_40456 S1 1127 1200
estExt_fgenesh1_pg.C_40456 S1 1221 1292
estExt_fgenesh1_pg.C_40456 S1 1308 1383

Links

Other S1 family RBPs
Other Myceliophthora thermophila RBPs

4 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CHGG_03087 Chaetomium globosum CHGG_03087 N 0.842
estExt_fgenesh2_pm.C_30393 Thielavia terrestris estExt_fgenesh2_pm.C_30393 N 0.827
scaffold_5-snap.658.1 Neurospora discreta scaffold_5-snap.658.1 N 0.730
Pa_7_6350 Podospora anserina Pa_7_6350 N 0.742