CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AMAG_17245
(
Allomyces macrogynus
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
AMAG_17245
T01193_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AMAG_17245T0
CCCH ZF
282
308
PKAKHCTYFQRFGTCSRGTACTLIHDP
AMAG_17245T0
CCCH ZF
338
361
NTPHCAHFQRGSCTNAACKFIHVK
AMAG_17245T0
CCCH ZF
364
384
PGAPVCRDFLDGYCPHGAQCT
Links
Other
CCCH ZF
family RBPs
Other
Allomyces macrogynus
RBPs
1 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AMAG_13967
Allomyces macrogynus
AMAG_13967
N
0.944