CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AGAP001272
(
Anopheles gambiae
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
AGAP001272
T01859_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AGAP001272-PA
CCCH ZF
355
364
PCPYGKKCTY
AGAP001272-PA
CCCH ZF
358
374
YGKKCTYGNKCKFYHPE
AGAP001272-PB
CCCH ZF
355
364
PCPYGKKCTY
AGAP001272-PB
CCCH ZF
358
374
YGKKCTYGNKCKFYHPE
Links
Other
CCCH ZF
family RBPs
Other
Anopheles gambiae
RBPs
16 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAEL011652
Aedes aegypti
AAEL011652
N
1.000
Ame_R008666
Ailuropoda melanoleuca
Ame_R008666
N
0.857
CPIJ001189
Culex quinquefasciatus
CPIJ001189
N
1.000
CpipJ_CPIJ001189
Culex pipiens
CpipJ_CPIJ001189
N
1.000
e_gw1.5.374.1
Trichoplax adhaerens
e_gw1.5.374.1
N
0.741
gw1.5.847.1
Lottia gigantea
gw1.5.847.1
N
0.893
PHUM352150
Pediculus humanus
PHUM352150
N
0.893
ZC3H12D
Gasterosteus aculeatus
ENSGACG00000006636
N
0.806
ZC3H12D
Taeniopygia guttata
ENSTGUG00000010664
N
0.964
ZC3H12D
Tupaia belangeri
ENSTBEG00000000892
N
0.800
ZC3H12D
Oryzias latipes
ENSORLG00000015280
N
0.774
ZC3H12D
Echinops telfairi
ENSETEG00000016119
N
0.857
ZC3H12D
Monodelphis domestica
ENSMODG00000016829
N
0.786
ZC3H12D
Macropus eugenii
ENSMEUG00000004686
N
0.821
ZC3H12D
Ochotona princeps
ENSOPRG00000014034
N
0.893