CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
ANIA_01537
(
Aspergillus nidulans
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
CADANIAG00008164
T02068_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADANIAP00008164
CCCH ZF
270
296
KKDELCQRFTTTGTCYKGPSCPYIHDP
CADANIAP00008164
CCCH ZF
297
321
NKVAICKDFLQTGKCSAGNSCDLSH
CADANIAP00008164
CCCH ZF
327
350
RSPACVHFLRGRCSNPECRYAHVR
CADANIAP00008164
CCCH ZF
353
379
PGAPVCRAFATLGYCDKGETCEERHVH
CADANIAP00008164
CCCH ZF
380
396
ECPDYANTGVCKKKHCR
Links
Other
CCCH ZF
family RBPs
Other
Aspergillus nidulans
RBPs
13 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ACLA_058900
Aspergillus clavatus
CADACLAG00005693
N
0.858
AFLA_078470
Aspergillus flavus
CADAFLAG00000629
N
0.817
AFUA_8G05480
Aspergillus fumigatus
CADAFUAG00003004
N
0.800
ATEG_07738
Aspergillus terreus
CADATEAG00000271
N
0.808
BDBG_04175
Blastomyces dermatitidis
BDBG_04175
N
0.744
HCAG_02832
Histoplasma capsulatum
HCAG_02832
N
0.736
NFIA_098210
Neosartorya fischeri
CADNFIAG00009091
N
0.817
Pc12g03020
Penicillium chrysogenum
Pc12g03020
N
0.825
PMAA_009150
Penicillium marneffei
PMAA_009150
N
0.783
TEQG_05649
Trichophyton equinum
TEQG_05649
N
0.724
TERG_05591
Trichophyton rubrum
TERG_05591
N
0.732
TESG_01626
Trichophyton tonsurans
TESG_01626
N
0.724
UREG_02689
Uncinocarpus reesii
UREG_02689
N
0.793