CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ZC3H4
(
Ornithorhynchus anatinus
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSOANG00000001794
T03018_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOANP00000002851
CCCH ZF
289
314
KGKVICKYFVEGRCTWGEHCNFSHDI
ENSOANP00000002851
CCCH ZF
318
343
KKRELCKFYITGFCARAENCPYMHGD
ENSOANP00000002851
CCCH ZF
344
367
FPCKLFHTTGNCINGDDCMFSHEP
Links
Other
CCCH ZF
family RBPs
Other
Ornithorhynchus anatinus
RBPs
33 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
estExt_fgenesh1_kg.C_660009
Melampsora laricis populina
estExt_fgenesh1_kg.C_660009
N
0.000
PGTG_18709
Puccinia graminis
PGTG_18709
N
0.000