ENSPPYG00000004644 (Pongo pygmaeus)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSPPYG00000004644 T03196_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ZC3H10
M083_0.6 		Homo sapiens SSAGCGM RNAcompete
Ray et al.(2013)
RNCMPT00085 		1.000
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPPYP00000005289 CCCH ZF 39 62
ENSPPYP00000005289 CCCH ZF 79 98
ENSPPYP00000005289 CCCH ZF 135 160

Links

Other CCCH ZF family RBPs
Other Pongo pygmaeus RBPs

27 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
A5HMN7_CHICK Gallus gallus ENSGALG00000006066 I 0.000
fgenesh2_pg.scaffold_81000033 Branchiostoma floridae fgenesh2_pg.scaffold_81000033 N 0.000
fgenesh2_pg.scaffold_93000116 Branchiostoma floridae fgenesh2_pg.scaffold_93000116 N 0.000
LOC100397507 Callithrix jacchus ENSCJAG00000004080 I 0.000
MBNL1 Monodelphis domestica ENSMODG00000015838 I 0.000
mbnl1 Danio rerio ENSDARG00000052978 N 0.000
MBNL1 Homo sapiens ENSG00000152601 D 0.000
mbnl2 Danio rerio ENSDARG00000018460 I 0.000
MBNL2 Equus caballus ENSECAG00000020574 N 0.000
MBNL3 Macaca mulatta ENSMMUG00000003071 I 0.000
MBNL3 Homo sapiens ENSG00000076770 I 0.000
Mbnl3 Mus musculus ENSMUSG00000036109 I 0.000
XR_020327.1 Pan troglodytes ENSPTRG00000022280 N 0.000