CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RGD1564243
(
Rattus norvegicus
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSRNOG00000015276
T03321_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000040501
CCCH ZF
100
125
PKSVVCAFFKQGQCTKGDKCKFFHDL
Links
Other
CCCH ZF
family RBPs
Other
Rattus norvegicus
RBPs
114 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AMAG_13098
Allomyces macrogynus
AMAG_13098
N
0.000