CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PTTG_03398
(
Puccinia triticina
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
PTTG_03398
T08355_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PTTG_03398T0
CCHC ZF
90
105
CFCCGEKGHIARDCPD
Links
Other
CCHC ZF
family RBPs
Other
Puccinia triticina
RBPs
14 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PTTG_01003
Puccinia triticina
PTTG_01003
N
0.722
PTTG_03581
Puccinia triticina
PTTG_03581
N
0.722
PTTG_03611
Puccinia triticina
PTTG_03611
N
0.722
PTTG_04681
Puccinia triticina
PTTG_04681
N
0.722
PTTG_05127
Puccinia triticina
PTTG_05127
N
0.722
PTTG_05310
Puccinia triticina
PTTG_05310
N
0.722
PTTG_06677
Puccinia triticina
PTTG_06677
N
0.722
PTTG_07033
Puccinia triticina
PTTG_07033
N
0.722
PTTG_07232
Puccinia triticina
PTTG_07232
N
0.778
PTTG_08329
Puccinia triticina
PTTG_08329
N
0.722
PTTG_09697
Puccinia triticina
PTTG_09697
N
0.722
PTTG_10004
Puccinia triticina
PTTG_10004
N
0.722
PTTG_10119
Puccinia triticina
PTTG_10119
N
0.722
PTTG_10278
Puccinia triticina
PTTG_10278
N
0.722