CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ZCCHC8
(
Ochotona princeps
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
ENSOPRG00000013758
T10376_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOPRP00000012561
CCHC ZF
227
244
PHCFNCGSEEHQMKDCPM
Links
Other
CCHC ZF
family RBPs
Other
Ochotona princeps
RBPs
38 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PHUM241330
Pediculus humanus
PHUM241330
I
0.000
XP_001178647.1
Strongylocentrotus purpuratus
XP_001178647.1
N
0.000
XP_001178879.1
Strongylocentrotus purpuratus
XP_001178879.1
N
0.000
XP_789661.1
Strongylocentrotus purpuratus
XP_789661.1
N
0.000