LOC_Os01g06810 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os01g06810 T10715_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os01g06810.1 CCHC ZF 405 422

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

118 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
5233_YDR404C Saccharomyces paradoxus 5233_YDR404C N 0.000
5333_YDR404C Saccharomyces bayanus 5333_YDR404C N 0.000
A7TTM8_VANPO Vanderwaltozyma polyspora A7TTM8_VANPO N 0.000
CAGL0F02673g Candida glabrata CAGL0F02673g N 0.000
RPB7 Saccharomyces cerevisiae YDR404C N 0.000
Scas_Contig632.27 Saccharomyces castellii Scas_Contig632.27 N 0.000
Skud_Contig1246.3 Saccharomyces kudriavzevii Skud_Contig1246.3 N 0.000
ZYRO0D11726g Zygosaccharomyces rouxii ZYRO0D11726g N 0.000